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MembershipFiled under: Podcasts | Tags: institute, award, stanley, plotkin, vaccinology, wistar, maurice, hilleman, merck, rubella
Dr. Stanley Plotkin, Professor Emeritus at the Wistar Institute and the University of Pennsylvania, Philadelphia
Stanley Plotkin is Professor Emeritus at the Wistar Institute and the University of Pennsylvania, Philadelphia. A renowned vaccinologist, Dr. Plotkin is, perhaps, best known for developing a highly successful vaccine for rubella back in 1968. We are still using the same vaccine 40 years later. Dr. Plotkin has been honored with the inaugural Maurice Hilleman / Merck Award for his lifetime of dedication to vaccinology.
For most people, rubella amounts to a bad rash and a crummy week, but for a fetus, the risks from infection are extremely serious. The rubella virus inhibits tissue growth in infected fetuses, often resulting in profound birth defects collectively referred to as congenital rubella syndrome.
Dr. Plotkin developed the rubella vaccine in the wake of a rubella pandemic in 1964, during which he estimates that about 1 in 100 women in his home city of Philadelphia came down with rubella. Nationwide, thousands of babies were born with congenital rubella syndrome in the wake of the outbreak. Thanks to the vaccine developed by Dr. Plotkin, rubella has essentially been eradicated in the U.S. and most other developed countries. In many parts of the developing world, efforts are underway to piggy back the rubella vaccine with the measles vaccine to eradicate both of these diseases everywhere else.
In this interview, I talked with Dr. Plotkin about the backlash against vaccines for their perceived safety risks, how he would change vaccine policy, and about the rewards of a career in vaccine development.
Filed under: Podcasts | Tags: antigen, biron, immune, Immunology, inate, interferons, microbiology, molecular, pathogens, system
Christine Biron, Ph.D., Esther Elizabeth Brintzenhoff Professor, Molecular Microbiology & Immunology, Brown Univeristy
Christine Biron is the chair of the Department of Molecular Microbiology and Immunology at Brown University in Providence, and she focuses her research program on the mechanisms of the innate immune system – the body’s system of non-specific munitions for fighting off pathogens. Dr. Biron is also a newly elected fellow of the American Academy of Microbiology.
When a pathogen gets on or in your body, your innate immune system is on the front lines, working against the pathogen is a non-specific manner. In research, the innate immune system got short shrift for a long time, and only in the last 10 or 20 years has the field picked up momentum. Dr. Biron says back when she was in graduate school “the innate immune system wasn’t thought to be very cool”, but she says the field is fast-moving today, in part because of some major discoveries involving Type-1 interferons, natural killer cells, and an increased appreciation of a wider range of antigen processing cells that link the innate and adaptive immune responses.
In this interview, I talked with Dr. Biron about our increasing awareness of the innate immune system, why it’s important to bring microbiologists and immunologists together under one big tent, and why it’s best that a battle between a virus and a host ends not in victory for one and defeat for the other, but in détente.
Filed under: Podcasts | Tags: Avian Bornavirus, biochemistry, derisi, dilatation, discovery, disease, eli lilly, genome, Immunology, malaria, microarray, microbiology, parrots, pathogen, proventricular, sars, sequence, viral
Joseph DeRisi, Ph.D., HHMI Investigator, University of California, San Francisco
Joseph DeRisi is a Professor of Biochemistry and Biophysics at the University of California, San Francisco and a Howard Hughes Medical Institute Investigator. His research focuses on two distinct areas: malaria and new viral pathogen discovery. Dr. DeRisi is this year’s recipient of the Eli Lilly and Company Research Award, granted in recognition of fundamental research of unusual merit in microbiology or immunology by an individual on the threshold of his or her career.
Discovering new viral pathogens seems like exciting work, and DeRisi has lots of ideas for prospecting. In one recent success with their viral microarray, his group recently helped identify the virus responsible for a devastating disease among rare parrots and other birds: proventricular dilatation disease, or PDD, has been recognized for 30 years, but veterinarians didn’t know the cause or how to control it. Now that DeRisi’s group has pinpointed Avian Bornavirus as the culprit and sequenced its genome, therapies and control measures to help both captive birds and birds in the wild can’t be far behind.
In this interview, I asked Dr. DeRisi whether he’s interested in putting the microarray approach to virus discovery to work in uncovering the causes of some human illnesses, especially those diseases we suspect might be spread by viruses, but for which we’ve never found a virus responsible. He has some very interesting ideas for where to start. We also talked about his work on identifying the SARS virus, and a new approach in the ongoing fight against malaria.
ID3 Podcast Image Provided by James Gathany Courtesy of the CDC.
Filed under: Podcasts | Tags: AIDS, carinii, commensal, fungus, genome, glucan, HIV, melanie cushion, Pneumocystis, pneumonia, protozoologist, synthase
Melanie Cushion, Ph.D., University of Cincinnati
Melanie Cushion holds down two jobs: she’s a research career scientist at the Veterans Administration Medical Center in Cincinnati, Ohio, and she’s also professor and associate chair for research in the department of internal medicine at the University of Cincinnati College of Medicine. Dr. Cushion focuses her research on the fungus, Pneumocystis carinii, which is a harmless commensal for most people, but a deadly pathogen for others.
Pneumocystis carinii was shrouded in obscurity for many years until its fifteen minutes in the spotlight came in the 80’s, when, unfortunately, an outbreak of Pneumocystis pneumonia prefigured the AIDS epidemic. Large numbers of previously healthy homosexual men in California became deathly ill with Pneumocystis pneumonia, and doctors knew something unusual (later found to be HIV) was going on. Dr. Cushion says Pneumocystis pneumonia is an opportunistic infection: it strikes individuals with immune systems too weak to fend it off. This explains why it was – and still is – a well-known sign that the patient is stricken with an active HIV infection or some other immune-suppressing disorder.
Dr. Cushion heads up the Pneumocystis genome project and she’s also looking into a new line of drugs called glucan synthase inhibitors, which have a profound effect on Pneumocystis’s life cycle and may offer new insights into managing the pathogen.
In this interview, I talked with Dr. Cushion about some of the more surprising results to come out of her genomics work, why Pneumocystis is a tough nut to crack in the laboratory, and about why she’s not giving her young investigator award back to the Society of Protozoologists any time soon.
Filed under: Podcasts | Tags: ASMCUE, BCG, CSU, disease, immune, Immunology, latency, lungs, microbiology, Orme, pathology, response, tb, tuberculosis, WHO
Ian Orme, Ph.D., Colorado State University
Ian Orme is a professor in the Department of Microbiology, Immunology, and Pathology at Colorado State University, and his research focuses on the immune response to tuberculosis (TB) – a bacterial disease that most often infects the lungs. He’s speaking at the American Society for Microbiology’s upcoming meeting on Continuing Undergraduate Education (ASMCUE).
In the U.S., TB seems like a thing of the past. Here, public health measures and medical care have all but wiped out the threat from this infection. But worldwide, the WHO says there were 9.2 million new TB cases in 2006 alone, and each person with TB infects an average of 10 to 15 people with the TB bacterium every year. (See the WHO’s fact sheet on TB. But brace yourself – this is some scary stuff.)
These are just some of the reasons Dr. Orme is delivering a talked titled “Tuberculosis: Why Now Is a Good Time to Leave the Planet” at ASMCUE. He admits leaving the planet isn’t a practical suggestion, but he wants to raise awareness of the disease and he’s not afraid to stir the pot a little. Orme and his group not only study the immune responses to TB bacteria, they’re also following a number of different avenues for developing new vaccines and improving the existing vaccine, BCG (bacille Calmette-Guérin).
In this interview, I talked with Dr. Orme about his vaccine work, why he thinks latent TB bacteria aren’t really latent, and how he sometimes feels like the wild-haired radical, cat-calling from the corner of the lecture hall.
Filed under: Podcasts | Tags: airborne, ariya, ASM, Atmosphere, bioaerosols, Chemistry, general, meeting, microorganisms, physics, weather
Parisa Ariya, Ph.D., McGill University, Montreal
Parisa Ariya is a professor in the Department of Atmospheric and Oceanic Sciences and the Chemistry Department at McGill University in Montreal. Dr. Ariya works mostly in atmospheric chemistry, but she’s also done a good deal of work with bioaerosols and airborne microorganisms. She’ll deliver a talk at the ASM general meeting in May titled Bioaerosols: Impact on Physics and Chemistry of the Atmosphere.
Bioaerosols – microscopic clumps of microorganisms and organic debris – arise through any of a number of mechanisms. The scientific community has come full circle on the idea of microorganisms in the atmosphere, according to Dr. Ariya. Back in the early days of microbiology it was widely recognized that the air is full of living, breathing microbes, but once our understanding of atmospheric chemistry and physics matured, the roles of microbes in atmospheric processes were marginalized. Thanks, in part, to Dr. Ariya’s work, the activities and functions of bioaerosols are getting new attention. We now know cells in bioaerosol particles can actively metabolize materials at interfaces, and Dr. Ariya says some of her future work will look into the details of these transformation processes and how they impact the atmosphere.
In this interview, I talked with Dr. Ariya about how bioaerosols are formed, what they’re doing, and why it isn’t a good idea to use bioaerosols to manage the weather.
Filed under: Podcasts | Tags: 2009, animals, antibiotic, ASM, Bacteria, bender, e coli, food, general, meeting, mrsa, organic, pathogen, pets, resistance, staph, veterinary
Jeff Bender, DVM, University of Minnesota
Jeff Bender is a professor of veterinary public health at the University of Minnesota, and his research interests lie in the intersection of animal health and human health, including animal-borne diseases of humans, food safety, and antibiotic resistant pathogens in animals. Dr. Bender will speak on “Methicillin-resistant Staphylococcus aureus (MRSA) in Veterinary Practice” at the American Society for Microbiology’s general meeting in Philadelphia this May.
To a microorganism, vertebrates can all look pretty similar. Dr. Bender’s work focuses on pathogens that can make themselves at home in both human bodies and the bodies of our pets and livestock. Outbreaks of bacterial illnesses from meat products are well publicized these days (the words “E. coli O157:H7” are linked to the words “beef recall” in my mind, at least), but the pathogens we have in common with animals don’t just travel in one direction. We humans can pass organisms and diseases to our animals, too. Dr. Bender says pets treated at veterinary clinics, for example, have come down with painful MRSA skin infections they picked up from their owners. Fluffy might become a temporary reservoir of MRSA in your home – capable of reinfecting you and your family, but the good news is that she probably won’t be a long term carrier of the bacterium.
In this interview, I asked Dr. Bender about MRSA in pets, whether farmers often get sick from animal-borne diseases, and whether he thinks it’s a good idea to “go organic” when shopping for food.
ID3 Podcast Image courtesy of prettywar-stl on Flickr under CC 2.0.
Filed under: Podcasts | Tags: antibiotic, award, Bacteria, bacteriology, bugs, carski, education, foundation, guts, gypsy, handelsman, insects, Microbes, moth, pathology, plant, resistance, science, soil, teaching, undergraduate
Jo Handelsman, Ph.D. University Wisconsin-Madison (Photo courtesy of University of Wisconsin-Madison)
Jo Handelsman is a professor at the University of Wisconsin, where she’s a member of the Department of Plant Pathology and chair of the Department of Bacteriology. Dr. Handelsman’s research focuses on microbial communities – their composition, how they’re structured, and how they work. Thanks to her work to improve the quality of undergraduate education, Dr. Handelsman is this year’s recipient of the American Society for Microbiology’s Carski Foundation Undergraduate Teaching Award.
Dr. Handelsman has been at the cutting edge of microbial science for years. After a long time spent studying the teeming communities of microorganisms that dwell in soil, Handelsman has pared down her focus to some arguably simpler neighborhoods: the guts of insects. Handelsman applies molecular methods to identify the strains and genes present in bug guts and combines this knowledge with other information about these environments to learn what these communities might be doing.
Handelsman also takes a particular interest in science education, and along with her colleagues Sarah Miller and Christine Pfund, she recently co-authored Scientific Teaching, a book that outlines a dynamic research- and results-driven approach to teaching college-level science.
In my interview with Dr. Handelsman, we talked about why microbiologists have a responsibility to educate almost everyone, why bacterial communities in the guts of gypsy moths might need genes for antibiotic resistance, and why and how bacteria inside of insects communicate. We also discussed the underrepresentation of women in academic research appointments and about how universities need to change to make these jobs both more available and attractive for all those brainy women who won’t (or can’t) make the jump from graduate school to academic research.
Filed under: Podcasts | Tags: genetics, genital, harvard, herpes, higgins, hsv-2, knipe, microbiology, molecular, professor, simplex, vaccine, virologist, virus
David Knipe, Ph.D., Harvard Medical School
David Knipe is the Higgins Professor of Microbiology and Molecular Genetics at Harvard Medical school. A virologist, Dr. Knipe focuses his research efforts on the herpes simplex virus 2 (HSV-2) – the virus we have to thank for genital herpes.
An astonishing 20% of Americans have been infected with HSV-2, and whether they’ve had a recognizable outbreak of sores or not, they can still carry the virus. Once you contract the HSV-2 it lays low in your nerve cells, waiting for the right moment to create watery blisters that eventually burst and release more virus particles. Dr. Knipe is interested in how the cells lead these two, very different lives: quiet and quiescent inside the nerve cell and loud and lytic in the epithelium on the surface of the body.
Genital herpes is no picnic, but the effects of HSV-2 infection are worst in people with depressed immune systems and in newborns; babies who pick up the virus during birth may suffer from neurological damage, brain damage, or even death. There is no cure for genital herpes, and no means of getting rid of HSV-2, only ways of managing outbreaks. But there is some hope of relief; Dr. Knipe’s lab has developed a vaccine that will enter the trial phase soon.
In this interview, I asked Dr. Knipe about how he got interested in viruses, about the vaccine he’s developed and who could hope to benefit from it, and why it’s taken science so long to develop a vaccine for this extremely common disease.
Filed under: Podcasts | Tags: ancient life, andrew knoll, ASM, evolution, intelligent design, Microbes, microbiology, schools, science
Andrew Knoll, Ph.D., Fisher Professor of Natural History, Harvard University
Dr. Andrew Knoll is the Fisher Professor of Natural History in Harvard University’s Department of Organismic and Evolutionary Biology, where he studies ancient life, its impacts on the environment, and how the environment, in turn, shaped the evolution of life. In recognition of the 200th anniversary of Charles’ Darwin’s birth and the 150th anniversary of the first printing of his book, “On the Origin of Species”, the American Society for Microbiology has invited Dr. Knoll to deliver the opening lecture, titled “Microbes and Earth History,” at the society’s general meeting in Philadelphia this year.
Before the dinosaurs, before trees and leaves, before trilobites, there were microbes. Vast, slimy layers of them covered the rocks and peppered the seas of the harsh, alien planet we now call Earth. Those slimy cells were our ancestors, and they played a defining role in changing that once-barren moonscape into the world we see today: a planet covered with diverse, striving life, topped by an oxygen-rich atmosphere. Dr. Knoll says he puts on his paleontologist’s hat and studies the fossil record to learn more about this ancient life, then he dons his geochemist’s hat to reconstruct Earth’s environmental history from the chemical signatures he finds in ancient sedimentary rocks. He weaves these two stories together to figure out how life has transformed the planet and how the planet has influenced the course of evolution.
In this interview, I talked with Dr. Knoll about what early earth must have looked like, his involvement with the Mars rover project, and about how intelligent design concepts may well belong in high school curricula, but not in the context of science class.
